Software

Software

Tools for animal breeding and quantitative genetics.
Apps load only after you open them (hosted on shinyapps.io).

Xmosome_blupf90kit

BLUPF90 parameter cards

Build renumf90 cards from phenotype, pedigree, and genotype inputs.

BLUPF90 Live
Details

genovieweR

Genotype quality control

SNP QC for call rate, MAF, HWE, and missingness.

Genomics QC Live
Details

pedivieweR

Pedigree visualization

Check pedigrees and explore relationship networks.

Pedigree Live
Details

dataprevieweR

Phenotype preview & QC

Fast tabular preview and basic phenotype checks.

Phenotype QC Live
Details

easyblup

blupf90 helpers

Prepare and organize blupf90 parameter workflows.

BLUPF90 Live
Details

Data Format Converter

Genetic format conversion

Convert among PLINK, BLUPF90, and VCF inputs.

Utilities Soon
Details